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1) CPGL: Prediction of Compound-Protein Interaction by Integrating Graph Attention Network With Long Short-Term Memory Neural Network - IEEE/ACM Trans Comput Biol Bioinform - 2022 2) GGNpTCR: A Generative Graph Structure Neural Network for Predicting Immunogenic Peptides for T-cell Immune Response - JOURNAL OF CHEMICAL INFORMATION AND MODELING - 2023 3) SCEBE: an efficient and scalable algorithm for genome-wide association studies on longitudinal outcomes with mixed-effects modeling - BRIEFINGS IN BIOINFORMATICS - 2021 4) A greedy approach for mutual exclusivity analysis in cancer study - BIOSTATISTICS - 2022 5) Identifying key circulating tumor DNA parameters for predicting clinical outcomes in metastatic non-squamous non-small cell lung cancer after first-line chemoimmunotherapy - Nature Communications - 2024
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